viewDose

#'viewDose plots representative processed well images with object centroids colored by type for each concentration of a drug.

Usage

viewDose(data, strain_name, drug_name, proc_img_dir)

Arguments

data

Unsummarised CellProfiler data output from the Xpress functon. Either the raw or processed data can be viewed.

strain_name

A character value for the strain to use in the plots, e.g. "N2".

drug_name

A character value for the drug to use in the plots, e.g. "paraquat".

proc_img_dir

The full path of the directory holding the processed images.

Value

A ggplot object with representative wells for each dose of the selected drug and strain. The user cannot specify the individual wells to be used. To view the results for a specific well use the viewWell function.