viewWell

viewWell plots the processed well image with object centroids colored by type.

Usage

viewWell(df, img_dir, plate, well, boxplot = TRUE)

Arguments

df

Unsummarised CellProfiler data output from the Xpress functon. Either the raw or processed data can be viewed.

img_dir

The full path of the directory holding the processed images.

plate

Desired plate to be analyzed.

well

Desired well to be analyzed.

boxplot

should output include boxplot of object data?

Value

A ggplot object with selected well image and boxplot.