joinGenoFulc

joinGenoFulc joins the collection data output from the procFulcrum function with the genotyping data output from the checkGenotypes function.

joinGenoFulc(geno, fulc, dir = NULL, select_vars = F)

Arguments

geno

a genotyping data frame output from the loadGenotypes function.

fulc

a collection data frame output from the procFulcrum function.

dir

OPTIONAL, the path to the base fulcrum directory, if passed will save the genotyping data in data/processed/genotypes.

select_vars

Logical, TRUE will return only the default variables, FALSE will return all variables. FALSE is recommended if using customized Fulcrum applications other than "Nematode field sampling" and "Nematode isolation". FALSE is default.

Value

A single collection dataframe with variables described in the data dictionary.